Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AL390955.1-201ENST00000428694 934 ntBASIC14.67□□□□□ -0.06
APOA1P02647 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.67□□□□□ -0.06
APOA1P02647 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.67□□□□□ -0.06
APOA1P02647 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.67□□□□□ -0.06
APOA1P02647 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.67□□□□□ -0.06
APOA1P02647 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.67□□□□□ -0.06
APOA1P02647 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.67□□□□□ -0.06
APOA1P02647 STK25P1-201ENST00000585406 838 ntBASIC14.67□□□□□ -0.06
APOA1P02647 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.67□□□□□ -0.06
APOA1P02647 AP000525.1-201ENST00000608286 694 ntBASIC14.67□□□□□ -0.06
APOA1P02647 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.67□□□□□ -0.06
APOA1P02647 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
APOA1P02647 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 LINC01101-201ENST00000622953 1884 ntBASIC14.67□□□□□ -0.06
APOA1P02647 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
APOA1P02647 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA1P02647 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 GGT4P-201ENST00000623672 1708 ntBASIC14.66□□□□□ -0.06
APOA1P02647 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
APOA1P02647 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
APOA1P02647 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
APOA1P02647 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
APOA1P02647 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
APOA1P02647 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 LINC00528-201ENST00000600723 2160 ntBASIC14.66□□□□□ -0.06
APOA1P02647 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.66□□□□□ -0.06
APOA1P02647 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.66□□□□□ -0.06
APOA1P02647 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 AL049757.1-201ENST00000616842 1596 ntBASIC14.66□□□□□ -0.06
APOA1P02647 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.66□□□□□ -0.06
APOA1P02647 AL353692.3-201ENST00000407031 1396 ntBASIC14.66□□□□□ -0.06
APOA1P02647 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.66□□□□□ -0.06
APOA1P02647 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
APOA1P02647 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.66□□□□□ -0.06
APOA1P02647 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.66□□□□□ -0.06
APOA1P02647 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.66□□□□□ -0.06
APOA1P02647 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.66□□□□□ -0.06
APOA1P02647 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.66□□□□□ -0.06
APOA1P02647 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.66□□□□□ -0.06
APOA1P02647 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.66□□□□□ -0.06
APOA1P02647 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.66□□□□□ -0.06
APOA1P02647 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA1P02647 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
APOA1P02647 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.65□□□□□ -0.06
APOA1P02647 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
APOA1P02647 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.65□□□□□ -0.06
APOA1P02647 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.65□□□□□ -0.06
APOA1P02647 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
APOA1P02647 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 INGX-201ENST00000359239 846 ntBASIC14.65□□□□□ -0.06
APOA1P02647 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
APOA1P02647 IGHGP-201ENST00000390555 1178 ntBASIC14.65□□□□□ -0.06
APOA1P02647 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
APOA1P02647 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
APOA1P02647 AC103564.2-201ENST00000432853 1299 ntBASIC14.65□□□□□ -0.06
APOA1P02647 AC007967.3-201ENST00000434308 558 ntBASIC14.65□□□□□ -0.06
APOA1P02647 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.65□□□□□ -0.06
APOA1P02647 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.65□□□□□ -0.06
APOA1P02647 AP003733.1-201ENST00000491725 852 ntBASIC14.65□□□□□ -0.06
APOA1P02647 AC122714.2-201ENST00000502787 707 ntBASIC14.65□□□□□ -0.06
APOA1P02647 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.65□□□□□ -0.06
APOA1P02647 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms