Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
HCN1O60741 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.37■□□□□ 0.05
HCN1O60741 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.37■□□□□ 0.05
HCN1O60741 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.37■□□□□ 0.05
HCN1O60741 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.37■□□□□ 0.05
HCN1O60741 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
HCN1O60741 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.36■□□□□ 0.05
HCN1O60741 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.36■□□□□ 0.05
HCN1O60741 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
HCN1O60741 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
HCN1O60741 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.36■□□□□ 0.05
HCN1O60741 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
HCN1O60741 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.36■□□□□ 0.05
HCN1O60741 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.36■□□□□ 0.05
HCN1O60741 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.36■□□□□ 0.05
HCN1O60741 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.36■□□□□ 0.05
HCN1O60741 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.36■□□□□ 0.05
HCN1O60741 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.36■□□□□ 0.05
HCN1O60741 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.36■□□□□ 0.05
HCN1O60741 FAM58CP-201ENST00000435741 640 ntBASIC15.36■□□□□ 0.05
HCN1O60741 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
HCN1O60741 CEND1P1-201ENST00000451006 455 ntBASIC15.36■□□□□ 0.05
HCN1O60741 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.36■□□□□ 0.05
HCN1O60741 SNHG9-202ENST00000564014 471 ntBASIC15.36■□□□□ 0.05
HCN1O60741 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.36■□□□□ 0.05
HCN1O60741 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.36■□□□□ 0.05
HCN1O60741 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.36■□□□□ 0.05
HCN1O60741 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.36■□□□□ 0.05
HCN1O60741 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.36■□□□□ 0.05
HCN1O60741 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.36■□□□□ 0.05
HCN1O60741 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.36■□□□□ 0.05
HCN1O60741 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.36■□□□□ 0.05
HCN1O60741 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.36■□□□□ 0.05
HCN1O60741 AC092850.2-201ENST00000623821 2697 ntBASIC15.36■□□□□ 0.05
HCN1O60741 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.36■□□□□ 0.05
HCN1O60741 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCN1O60741 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.36■□□□□ 0.05
HCN1O60741 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.35■□□□□ 0.05
HCN1O60741 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
HCN1O60741 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
HCN1O60741 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.35■□□□□ 0.05
HCN1O60741 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.35■□□□□ 0.05
HCN1O60741 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCN1O60741 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.35■□□□□ 0.05
HCN1O60741 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.35■□□□□ 0.05
HCN1O60741 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HCN1O60741 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HCN1O60741 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCN1O60741 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCN1O60741 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCN1O60741 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HCN1O60741 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCN1O60741 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HCN1O60741 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.35■□□□□ 0.05
HCN1O60741 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCN1O60741 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCN1O60741 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.35■□□□□ 0.05
HCN1O60741 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCN1O60741 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCN1O60741 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.35■□□□□ 0.05
HCN1O60741 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCN1O60741 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.35■□□□□ 0.05
HCN1O60741 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCN1O60741 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.35■□□□□ 0.05
HCN1O60741 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.35■□□□□ 0.05
HCN1O60741 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.35■□□□□ 0.05
HCN1O60741 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.35■□□□□ 0.05
HCN1O60741 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.35■□□□□ 0.05
HCN1O60741 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.35■□□□□ 0.05
HCN1O60741 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.35■□□□□ 0.05
HCN1O60741 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.35■□□□□ 0.05
HCN1O60741 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCN1O60741 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCN1O60741 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.35■□□□□ 0.05
HCN1O60741 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.35■□□□□ 0.05
HCN1O60741 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCN1O60741 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms