Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.69□□□□□ -0.06
TVP23AA6NH52 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 MRPL20P1-201ENST00000400819 433 ntBASIC14.69□□□□□ -0.06
TVP23AA6NH52 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 AC148477.8-201ENST00000624298 468 ntBASIC14.69□□□□□ -0.06
TVP23AA6NH52 AC005593.1-201ENST00000624894 515 ntBASIC14.69□□□□□ -0.06
TVP23AA6NH52 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TVP23AA6NH52 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TVP23AA6NH52 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 AC012569.1-201ENST00000591191 1524 ntBASIC14.68□□□□□ -0.06
TVP23AA6NH52 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 AC018712.1-201ENST00000455767 687 ntBASIC14.68□□□□□ -0.06
TVP23AA6NH52 AC108073.2-201ENST00000464002 357 ntBASIC14.68□□□□□ -0.06
TVP23AA6NH52 AF186996.4-201ENST00000467186 377 ntBASIC14.68□□□□□ -0.06
TVP23AA6NH52 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 AL121912.1-201ENST00000603683 238 ntBASIC14.68□□□□□ -0.06
TVP23AA6NH52 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 AC010654.1-201ENST00000615722 808 ntBASIC14.68□□□□□ -0.06
TVP23AA6NH52 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 PRAL-201ENST00000624952 3286 ntBASIC14.68□□□□□ -0.06
TVP23AA6NH52 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
TVP23AA6NH52 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TVP23AA6NH52 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.67□□□□□ -0.06
TVP23AA6NH52 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TVP23AA6NH52 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.67□□□□□ -0.06
TVP23AA6NH52 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms