Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
HFM1A2PYH4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
HFM1A2PYH4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
HFM1A2PYH4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
HFM1A2PYH4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC23.91■■□□□ 1.42
HFM1A2PYH4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC23.91■■□□□ 1.42
HFM1A2PYH4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC23.91■■□□□ 1.42
HFM1A2PYH4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
HFM1A2PYH4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC23.91■■□□□ 1.42
HFM1A2PYH4 AC004461.2-201ENST00000629517 803 ntBASIC23.91■■□□□ 1.42
HFM1A2PYH4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
HFM1A2PYH4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
HFM1A2PYH4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC23.91■■□□□ 1.42
HFM1A2PYH4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC23.91■■□□□ 1.42
HFM1A2PYH4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
HFM1A2PYH4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
HFM1A2PYH4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HFM1A2PYH4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HFM1A2PYH4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC23.9■■□□□ 1.42
HFM1A2PYH4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
HFM1A2PYH4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
HFM1A2PYH4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC23.9■■□□□ 1.42
HFM1A2PYH4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC23.9■■□□□ 1.42
HFM1A2PYH4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC23.9■■□□□ 1.42
HFM1A2PYH4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HFM1A2PYH4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC23.9■■□□□ 1.42
HFM1A2PYH4 RPL13P2-201ENST00000440687 659 ntBASIC23.9■■□□□ 1.42
HFM1A2PYH4 SDHAP3-202ENST00000515467 728 ntBASIC23.9■■□□□ 1.42
HFM1A2PYH4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
HFM1A2PYH4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
HFM1A2PYH4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
HFM1A2PYH4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC23.9■■□□□ 1.42
HFM1A2PYH4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC23.9■■□□□ 1.42
HFM1A2PYH4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC23.9■■□□□ 1.42
HFM1A2PYH4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HFM1A2PYH4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC23.9■■□□□ 1.42
HFM1A2PYH4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HFM1A2PYH4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
HFM1A2PYH4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HFM1A2PYH4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
HFM1A2PYH4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
HFM1A2PYH4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
HFM1A2PYH4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC23.89■■□□□ 1.42
HFM1A2PYH4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC23.89■■□□□ 1.42
HFM1A2PYH4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
HFM1A2PYH4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
HFM1A2PYH4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
HFM1A2PYH4 AL118508.1-201ENST00000613502 2345 ntBASIC23.89■■□□□ 1.41
HFM1A2PYH4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC23.89■■□□□ 1.41
HFM1A2PYH4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
HFM1A2PYH4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HFM1A2PYH4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HFM1A2PYH4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
HFM1A2PYH4 AL589987.1-201ENST00000453380 819 ntBASIC23.89■■□□□ 1.41
HFM1A2PYH4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC23.89■■□□□ 1.41
HFM1A2PYH4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC23.89■■□□□ 1.41
HFM1A2PYH4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC23.89■■□□□ 1.41
HFM1A2PYH4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
HFM1A2PYH4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
HFM1A2PYH4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HFM1A2PYH4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
HFM1A2PYH4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC23.89■■□□□ 1.41
HFM1A2PYH4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
HFM1A2PYH4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
HFM1A2PYH4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
HFM1A2PYH4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC23.89■■□□□ 1.41
HFM1A2PYH4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HFM1A2PYH4 REXO1L1P-202ENST00000608646 1974 ntBASIC23.88■■□□□ 1.41
HFM1A2PYH4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HFM1A2PYH4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HFM1A2PYH4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
HFM1A2PYH4 AC011477.6-201ENST00000604980 1927 ntBASIC23.88■■□□□ 1.41
HFM1A2PYH4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC23.88■■□□□ 1.41
HFM1A2PYH4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
HFM1A2PYH4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
HFM1A2PYH4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HFM1A2PYH4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HFM1A2PYH4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
HFM1A2PYH4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
HFM1A2PYH4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
HFM1A2PYH4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC23.88■■□□□ 1.41
HFM1A2PYH4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC23.88■■□□□ 1.41
HFM1A2PYH4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HFM1A2PYH4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HFM1A2PYH4 EHF-205ENST00000527935 557 ntTSL 2 BASIC23.88■■□□□ 1.41
HFM1A2PYH4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HFM1A2PYH4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC23.88■■□□□ 1.41
HFM1A2PYH4 AL132655.2-201ENST00000596276 594 ntBASIC23.88■■□□□ 1.41
HFM1A2PYH4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC23.88■■□□□ 1.41
HFM1A2PYH4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC23.88■■□□□ 1.41
HFM1A2PYH4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HFM1A2PYH4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HFM1A2PYH4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HFM1A2PYH4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HFM1A2PYH4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC23.88■■□□□ 1.41
HFM1A2PYH4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
HFM1A2PYH4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
HFM1A2PYH4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HFM1A2PYH4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC23.87■■□□□ 1.41
HFM1A2PYH4 AC063926.2-201ENST00000623766 1308 ntBASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms