Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC091304.2-201ENST00000564639 760 ntBASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 AL445228.2-201ENST00000605589 952 ntBASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC107918.4-202ENST00000641623 219 ntBASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-7A0A0A0MS04 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 RPS15P9-201ENST00000494093 319 ntBASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC021087.4-201ENST00000563761 564 ntBASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 CICP13-201ENST00000422015 2789 ntBASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 SSR4P1-203ENST00000599569 2260 ntBASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-7A0A0A0MS04 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 KRT18P27-201ENST00000427733 1299 ntBASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 SAPCD2P3-201ENST00000455031 850 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms