Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 CETN4P-206ENST00000642099 2168 ntBASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 AC100757.3-201ENST00000622361 1406 ntBASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 TNRC18P3-201ENST00000441896 2691 ntBASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 HLA-V-204ENST00000476601 1289 ntBASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 AL589739.1-201ENST00000607720 493 ntBASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LINC00588Q9Y4M8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 U82695.1-201ENST00000635752 1889 ntBASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 PRORSD1P-202ENST00000563365 2154 ntBASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 CALY-203ENST00000368558 825 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
LINC00588Q9Y4M8 TSPY16P-201ENST00000449843 468 ntBASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms