Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 HNRNPUP1-201ENST00000554987 333 ntBASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.81■■□□□ 1.08
NPC1L1Q9UHC9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 SERBP1P3-201ENST00000459980 809 ntBASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 AL033527.5-202ENST00000641632 1098 ntBASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPC1L1Q9UHC9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPC1L1Q9UHC9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 REXO1L1P-202ENST00000608646 1974 ntBASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 MRPS18AP1-201ENST00000414458 589 ntBASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 AC027369.6-201ENST00000525520 931 ntBASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 AC025048.3-201ENST00000590609 569 ntBASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 AC097359.3-201ENST00000603982 1210 ntBASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 AC005702.4-201ENST00000618393 416 ntBASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC21.78■■□□□ 1.08
NPC1L1Q9UHC9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms