Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 BASP1P1-201ENST00000430708 665 ntBASIC15.42■□□□□ 0.06
CTSFQ9UBX1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 AC092364.2-202ENST00000597012 1073 ntBASIC15.42■□□□□ 0.06
CTSFQ9UBX1 AL158211.3-201ENST00000607385 239 ntBASIC15.42■□□□□ 0.06
CTSFQ9UBX1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSFQ9UBX1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 AL353705.2-201ENST00000428243 662 ntBASIC15.41■□□□□ 0.06
CTSFQ9UBX1 AC092580.3-201ENST00000430932 139 ntBASIC15.41■□□□□ 0.06
CTSFQ9UBX1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 AC097493.3-201ENST00000509725 367 ntBASIC15.41■□□□□ 0.06
CTSFQ9UBX1 RNA5SP421-201ENST00000516864 134 ntBASIC15.41■□□□□ 0.06
CTSFQ9UBX1 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 LINC02084-201ENST00000606069 1096 ntBASIC15.41■□□□□ 0.06
CTSFQ9UBX1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 SPDYE12P-201ENST00000618416 771 ntBASIC15.41■□□□□ 0.06
CTSFQ9UBX1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 AL589702.1-201ENST00000641229 1509 ntBASIC15.41■□□□□ 0.06
CTSFQ9UBX1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSFQ9UBX1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 INGX-202ENST00000489074 768 ntBASIC15.4■□□□□ 0.06
CTSFQ9UBX1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.4■□□□□ 0.06
CTSFQ9UBX1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms