Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 SLC25A39P2-201ENST00000537614 270 ntBASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 MIR3687-2-201ENST00000577708 61 ntBASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 MIR3687-1-201ENST00000614492 61 ntBASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 AC055717.3-201ENST00000622967 595 ntBASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 LINC02447-202ENST00000501888 2146 ntBASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.17■□□□□ 0.5
BLOC1S4Q9NUP1 AC008741.2-201ENST00000612792 3115 ntBASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 AC007950.2-201ENST00000615045 2347 ntBASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 FAM220BP-201ENST00000377689 816 ntBASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.16■□□□□ 0.5
BLOC1S4Q9NUP1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 AC022188.1-201ENST00000620960 1664 ntBASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 AC245100.5-201ENST00000452108 331 ntBASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 IGHV3-62-201ENST00000520057 340 ntBASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BLOC1S4Q9NUP1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BLOC1S4Q9NUP1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.14■□□□□ 0.5
BLOC1S4Q9NUP1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.14■□□□□ 0.5
BLOC1S4Q9NUP1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BLOC1S4Q9NUP1 UXT-AS1-201ENST00000590504 1525 ntBASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms