Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 KRT18P55-202ENST00000578578 1546 ntBASIC14.93□□□□□ -0.02
CHD8Q9HCK8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 AL023775.1-201ENST00000454907 1746 ntBASIC14.92□□□□□ -0.02
CHD8Q9HCK8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 RN7SL11P-201ENST00000471305 293 ntBASIC14.92□□□□□ -0.02
CHD8Q9HCK8 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 TUBBP5-203ENST00000508529 1334 ntBASIC14.92□□□□□ -0.02
CHD8Q9HCK8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 AC106794.1-201ENST00000506935 792 ntBASIC14.92□□□□□ -0.02
CHD8Q9HCK8 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CHD8Q9HCK8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 DDX39AP1-201ENST00000445147 1181 ntBASIC14.91□□□□□ -0.02
CHD8Q9HCK8 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 AC127024.7-201ENST00000625101 200 ntBASIC14.91□□□□□ -0.02
CHD8Q9HCK8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 AC026316.1-201ENST00000398900 414 ntBASIC14.91□□□□□ -0.02
CHD8Q9HCK8 SERBP1P2-201ENST00000436888 1164 ntBASIC14.91□□□□□ -0.02
CHD8Q9HCK8 AC093724.1-201ENST00000448659 1027 ntBASIC14.91□□□□□ -0.02
CHD8Q9HCK8 AL590640.2-201ENST00000457038 527 ntBASIC14.91□□□□□ -0.02
CHD8Q9HCK8 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms