Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE5Q9HCH3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE5Q9HCH3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE5Q9HCH3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE5Q9HCH3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE5Q9HCH3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE5Q9HCH3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE5Q9HCH3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CPNE5Q9HCH3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE5Q9HCH3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE5Q9HCH3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE5Q9HCH3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CPNE5Q9HCH3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 LINC01225-203ENST00000563550 1244 ntBASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CPNE5Q9HCH3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CPNE5Q9HCH3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 AC023824.1-201ENST00000562945 2975 ntBASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 MRPS18AP1-201ENST00000414458 589 ntBASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 ARSEP1-201ENST00000420443 635 ntBASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 AC241585.1-201ENST00000433527 519 ntBASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 AC004890.2-204ENST00000481968 304 ntBASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 KRT8P23-201ENST00000560090 1207 ntBASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 AC004233.3-201ENST00000607794 1269 ntBASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE5Q9HCH3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms