Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 AD001527.2-201ENST00000622994 785 ntBASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 AC087386.2-201ENST00000623212 4637 ntBASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SND1-IT1Q9HBX3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 AL645929.1-201ENST00000420084 975 ntBASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 AL845331.1-201ENST00000424978 1190 ntBASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SND1-IT1Q9HBX3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SND1-IT1Q9HBX3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms