Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 AC002056.1-201ENST00000395613 760 ntBASIC15.68■□□□□ 0.1
BRF2Q9HAW0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 RNA5SP416-201ENST00000516838 111 ntBASIC15.68■□□□□ 0.1
BRF2Q9HAW0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
BRF2Q9HAW0 AC008894.3-201ENST00000624324 3103 ntBASIC15.68■□□□□ 0.1
BRF2Q9HAW0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 AC112504.1-201ENST00000623415 1841 ntBASIC15.67■□□□□ 0.1
BRF2Q9HAW0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 AC106730.1-201ENST00000566722 1090 ntBASIC15.67■□□□□ 0.1
BRF2Q9HAW0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 AC027601.4-201ENST00000611259 610 ntBASIC15.67■□□□□ 0.1
BRF2Q9HAW0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 FAM197Y3-203ENST00000618346 717 ntBASIC15.67■□□□□ 0.1
BRF2Q9HAW0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRF2Q9HAW0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.66■□□□□ 0.1
BRF2Q9HAW0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 AP002472.1-201ENST00000577490 586 ntBASIC15.66■□□□□ 0.1
BRF2Q9HAW0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms