Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 KRT18P64-201ENST00000434946 1219 ntBASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 AC007551.1-201ENST00000457394 519 ntBASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 POU5F1P6-201ENST00000466990 990 ntBASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 FTH1P14-201ENST00000482930 551 ntBASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 AC103810.3-201ENST00000583567 96 ntBASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 AL592424.1-201ENST00000563624 1536 ntBASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 AC012441.1-201ENST00000446669 685 ntBASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 AC009486.1-201ENST00000569860 813 ntBASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CNTNAP4Q9C0A0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 C1QBPP1-201ENST00000400117 770 ntBASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 HAUS4P1-201ENST00000406739 1145 ntBASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 BAATP1-201ENST00000412284 1225 ntBASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 SLED1-202ENST00000512051 380 ntBASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 BNIP3P1-202ENST00000550043 1585 ntBASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CNTNAP4Q9C0A0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms