Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXP3Q9BZS1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 LINC02447-202ENST00000501888 2146 ntBASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 AC112482.1-201ENST00000492080 688 ntBASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 AC006557.2-201ENST00000592985 1240 ntBASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 AP001350.2-201ENST00000625104 1094 ntBASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXP3Q9BZS1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
FOXP3Q9BZS1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
FOXP3Q9BZS1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
FOXP3Q9BZS1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
FOXP3Q9BZS1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
FOXP3Q9BZS1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
FOXP3Q9BZS1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.96■□□□□ 0.3
FOXP3Q9BZS1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 AL353732.1-201ENST00000569618 1459 ntBASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 KRT18P27-201ENST00000427733 1299 ntBASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 AC069224.1-201ENST00000566372 1715 ntBASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.95■□□□□ 0.3
FOXP3Q9BZS1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 DNAJB3-201ENST00000446806 729 ntBASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 AC108751.1-201ENST00000490852 363 ntBASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 PGM5P2-202ENST00000637225 1043 ntBASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXP3Q9BZS1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms