Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 COX5BP8-201ENST00000416911 349 ntBASIC17.03■□□□□ 0.32
LRRC3Q9BY71 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 TP53TG3HP-202ENST00000569755 579 ntBASIC17.03■□□□□ 0.32
LRRC3Q9BY71 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC3Q9BY71 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 RN7SL692P-201ENST00000464677 288 ntBASIC17.02■□□□□ 0.32
LRRC3Q9BY71 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 AC135586.1-201ENST00000539323 574 ntBASIC17.02■□□□□ 0.32
LRRC3Q9BY71 AC044860.1-202ENST00000559481 777 ntBASIC17.02■□□□□ 0.32
LRRC3Q9BY71 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.02■□□□□ 0.32
LRRC3Q9BY71 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LRRC3Q9BY71 AL358472.5-202ENST00000641448 1267 ntBASIC17.02■□□□□ 0.32
LRRC3Q9BY71 AC105020.1-201ENST00000435356 2205 ntBASIC17.02■□□□□ 0.32
LRRC3Q9BY71 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC3Q9BY71 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC3Q9BY71 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
LRRC3Q9BY71 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC3Q9BY71 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC3Q9BY71 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
LRRC3Q9BY71 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.02■□□□□ 0.31
LRRC3Q9BY71 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
LRRC3Q9BY71 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC3Q9BY71 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 AC005915.1-201ENST00000624912 2018 ntBASIC17.01■□□□□ 0.31
LRRC3Q9BY71 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 GNAQP1-201ENST00000444815 1067 ntBASIC17.01■□□□□ 0.31
LRRC3Q9BY71 RN7SL618P-201ENST00000477850 296 ntBASIC17.01■□□□□ 0.31
LRRC3Q9BY71 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 AL132655.2-201ENST00000596276 594 ntBASIC17.01■□□□□ 0.31
LRRC3Q9BY71 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC3Q9BY71 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms