Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
GABARAPL3Q9BY60 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 PI4KAP1-204ENST00000612579 1703 ntBASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 CICP24-201ENST00000605464 2705 ntBASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 PTCHD3P3-201ENST00000403073 906 ntBASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
GABARAPL3Q9BY60 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 AC104819.1-201ENST00000504587 486 ntBASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 AC106795.1-205ENST00000512851 1056 ntBASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 AL160237.2-201ENST00000556165 472 ntBASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 NKAPP1-205ENST00000585790 367 ntBASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 AC004706.3-202ENST00000621574 984 ntBASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABARAPL3Q9BY60 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
GABARAPL3Q9BY60 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.9□□□□□ -0.02
GABARAPL3Q9BY60 CICP13-201ENST00000422015 2789 ntBASIC14.9□□□□□ -0.02
GABARAPL3Q9BY60 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.9□□□□□ -0.02
GABARAPL3Q9BY60 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GABARAPL3Q9BY60 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GABARAPL3Q9BY60 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms