Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCGF1Q9BSM1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 AC023824.1-201ENST00000562945 2975 ntBASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 AC254562.1-201ENST00000417586 456 ntBASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 HCG4-201ENST00000418983 998 ntBASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 CNN2P11-201ENST00000429351 262 ntBASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 AP001350.2-201ENST00000625104 1094 ntBASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 AC092902.6-201ENST00000641783 218 ntBASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCGF1Q9BSM1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 HMGA1P7-201ENST00000406908 502 ntBASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCGF1Q9BSM1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms