Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC10.92□□□□□ -0.66
LITAFQ99732 IRX5-204ENST00000560154 879 ntTSL 5 BASIC10.92□□□□□ -0.66
LITAFQ99732 EMC9-206ENST00000560403 872 ntTSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 AC010947.1-201ENST00000623454 693 ntBASIC10.92□□□□□ -0.66
LITAFQ99732 AL023973.1-201ENST00000624619 620 ntBASIC10.92□□□□□ -0.66
LITAFQ99732 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
LITAFQ99732 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 AC007686.3-201ENST00000619017 3487 ntBASIC10.92□□□□□ -0.66
LITAFQ99732 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
LITAFQ99732 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
LITAFQ99732 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LITAFQ99732 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 AJ011931.1-201ENST00000618749 2492 ntBASIC10.92□□□□□ -0.66
LITAFQ99732 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC10.92□□□□□ -0.66
LITAFQ99732 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LITAFQ99732 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC10.92□□□□□ -0.66
LITAFQ99732 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC10.92□□□□□ -0.66
LITAFQ99732 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC10.91□□□□□ -0.66
LITAFQ99732 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC10.91□□□□□ -0.66
LITAFQ99732 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LITAFQ99732 OS9-204ENST00000389146 2091 ntTSL 2 BASIC10.91□□□□□ -0.66
LITAFQ99732 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC10.91□□□□□ -0.66
LITAFQ99732 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LITAFQ99732 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
LITAFQ99732 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC10.91□□□□□ -0.66
LITAFQ99732 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LITAFQ99732 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 C8orf49-201ENST00000525043 1968 ntBASIC10.91□□□□□ -0.66
LITAFQ99732 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC10.91□□□□□ -0.66
LITAFQ99732 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC10.91□□□□□ -0.66
LITAFQ99732 HLA-L-209ENST00000420110 1011 ntBASIC10.91□□□□□ -0.66
LITAFQ99732 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 SIGLEC30P-201ENST00000455569 941 ntBASIC10.91□□□□□ -0.66
LITAFQ99732 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC10.91□□□□□ -0.66
LITAFQ99732 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 CD320-202ENST00000537716 1119 ntTSL 2 BASIC10.91□□□□□ -0.66
LITAFQ99732 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC10.91□□□□□ -0.66
LITAFQ99732 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC10.91□□□□□ -0.66
LITAFQ99732 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC10.91□□□□□ -0.66
LITAFQ99732 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LITAFQ99732 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC10.91□□□□□ -0.66
LITAFQ99732 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
LITAFQ99732 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC10.91□□□□□ -0.66
LITAFQ99732 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC10.91□□□□□ -0.66
LITAFQ99732 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LITAFQ99732 Z83836.1-201ENST00000624605 1642 ntBASIC10.91□□□□□ -0.66
LITAFQ99732 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
LITAFQ99732 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 AC063926.3-201ENST00000624734 5658 ntBASIC10.9□□□□□ -0.66
LITAFQ99732 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LITAFQ99732 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms