Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 AL662799.1-202ENST00000614205 422 ntBASIC18.99■□□□□ 0.63
CCDC17Q96LX7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 PKD1P1-201ENST00000458669 6805 ntBASIC18.99■□□□□ 0.63
CCDC17Q96LX7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 AC080080.1-201ENST00000625121 2420 ntBASIC18.99■□□□□ 0.63
CCDC17Q96LX7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC17Q96LX7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC17Q96LX7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 AC004987.2-201ENST00000395959 1148 ntBASIC18.97■□□□□ 0.63
CCDC17Q96LX7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 AL358472.5-202ENST00000641448 1267 ntBASIC18.97■□□□□ 0.63
CCDC17Q96LX7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 AL691432.1-201ENST00000596308 1422 ntBASIC18.97■□□□□ 0.63
CCDC17Q96LX7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC17Q96LX7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms