Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ITCHQ96J02 LINC02447-202ENST00000501888 2146 ntBASIC15.67■□□□□ 0.1
ITCHQ96J02 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
ITCHQ96J02 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ITCHQ96J02 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.67■□□□□ 0.1
ITCHQ96J02 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.67■□□□□ 0.1
ITCHQ96J02 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
ITCHQ96J02 NORAD-201ENST00000565493 5339 ntBASIC15.67■□□□□ 0.1
ITCHQ96J02 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ITCHQ96J02 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ITCHQ96J02 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITCHQ96J02 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITCHQ96J02 MIR648-201ENST00000385046 94 ntBASIC15.67■□□□□ 0.1
ITCHQ96J02 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.67■□□□□ 0.1
ITCHQ96J02 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.67■□□□□ 0.1
ITCHQ96J02 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.67■□□□□ 0.1
ITCHQ96J02 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.67■□□□□ 0.1
ITCHQ96J02 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.67■□□□□ 0.1
ITCHQ96J02 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.67■□□□□ 0.1
ITCHQ96J02 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.67■□□□□ 0.1
ITCHQ96J02 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ITCHQ96J02 LINC01711-201ENST00000598340 967 ntBASIC15.67■□□□□ 0.1
ITCHQ96J02 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.67■□□□□ 0.1
ITCHQ96J02 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.67■□□□□ 0.1
ITCHQ96J02 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITCHQ96J02 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITCHQ96J02 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ITCHQ96J02 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITCHQ96J02 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITCHQ96J02 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.67■□□□□ 0.1
ITCHQ96J02 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.67■□□□□ 0.1
ITCHQ96J02 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITCHQ96J02 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.67■□□□□ 0.1
ITCHQ96J02 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.67■□□□□ 0.1
ITCHQ96J02 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ITCHQ96J02 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITCHQ96J02 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITCHQ96J02 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITCHQ96J02 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ITCHQ96J02 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ITCHQ96J02 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
ITCHQ96J02 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITCHQ96J02 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
ITCHQ96J02 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITCHQ96J02 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITCHQ96J02 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 AP005117.1-202ENST00000581724 1908 ntBASIC15.66■□□□□ 0.1
ITCHQ96J02 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ITCHQ96J02 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.66■□□□□ 0.1
ITCHQ96J02 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ITCHQ96J02 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ITCHQ96J02 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
ITCHQ96J02 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 HCG4P8-203ENST00000443049 980 ntBASIC15.66■□□□□ 0.1
ITCHQ96J02 SAPCD2P3-201ENST00000455031 850 ntBASIC15.66■□□□□ 0.1
ITCHQ96J02 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.66■□□□□ 0.1
ITCHQ96J02 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.66■□□□□ 0.1
ITCHQ96J02 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.66■□□□□ 0.1
ITCHQ96J02 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.66■□□□□ 0.1
ITCHQ96J02 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.66■□□□□ 0.1
ITCHQ96J02 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.66■□□□□ 0.1
ITCHQ96J02 AL445228.2-201ENST00000605589 952 ntBASIC15.66■□□□□ 0.1
ITCHQ96J02 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.66■□□□□ 0.1
ITCHQ96J02 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 AC092384.3-202ENST00000564646 2873 ntBASIC15.66■□□□□ 0.1
ITCHQ96J02 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.66■□□□□ 0.1
ITCHQ96J02 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.66■□□□□ 0.1
ITCHQ96J02 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.66■□□□□ 0.1
ITCHQ96J02 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ITCHQ96J02 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.66■□□□□ 0.1
ITCHQ96J02 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.66■□□□□ 0.1
ITCHQ96J02 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 AC112504.1-201ENST00000623415 1841 ntBASIC15.66■□□□□ 0.1
ITCHQ96J02 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.66■□□□□ 0.1
ITCHQ96J02 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ITCHQ96J02 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITCHQ96J02 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.65■□□□□ 0.1
ITCHQ96J02 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ITCHQ96J02 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
ITCHQ96J02 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.65■□□□□ 0.1
ITCHQ96J02 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.65■□□□□ 0.1
ITCHQ96J02 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.65■□□□□ 0.1
ITCHQ96J02 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms