Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.64■□□□□ 0.41
LRCH3Q96II8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRCH3Q96II8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRCH3Q96II8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRCH3Q96II8 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRCH3Q96II8 RPL17P11-201ENST00000417593 544 ntBASIC17.64■□□□□ 0.41
LRCH3Q96II8 AL355334.1-201ENST00000417713 215 ntBASIC17.64■□□□□ 0.41
LRCH3Q96II8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRCH3Q96II8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 CU634019.7-201ENST00000624153 1185 ntBASIC17.64■□□□□ 0.41
LRCH3Q96II8 FP236241.2-201ENST00000624906 1185 ntBASIC17.64■□□□□ 0.41
LRCH3Q96II8 AC080080.1-201ENST00000625121 2420 ntBASIC17.64■□□□□ 0.41
LRCH3Q96II8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRCH3Q96II8 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.64■□□□□ 0.41
LRCH3Q96II8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRCH3Q96II8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRCH3Q96II8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRCH3Q96II8 PCDHA12-202ENST00000613593 2588 ntBASIC17.64■□□□□ 0.41
LRCH3Q96II8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRCH3Q96II8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRCH3Q96II8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.64■□□□□ 0.41
LRCH3Q96II8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRCH3Q96II8 KRT8P22-201ENST00000562317 1415 ntBASIC17.64■□□□□ 0.41
LRCH3Q96II8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRCH3Q96II8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRCH3Q96II8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRCH3Q96II8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRCH3Q96II8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRCH3Q96II8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRCH3Q96II8 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRCH3Q96II8 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRCH3Q96II8 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 AC026954.1-201ENST00000429771 1293 ntBASIC17.63■□□□□ 0.41
LRCH3Q96II8 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 FAM86HP-204ENST00000513466 959 ntBASIC17.63■□□□□ 0.41
LRCH3Q96II8 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 AC244452.3-201ENST00000636814 210 ntBASIC17.63■□□□□ 0.41
LRCH3Q96II8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRCH3Q96II8 AL645608.8-201ENST00000606034 2086 ntBASIC17.63■□□□□ 0.41
LRCH3Q96II8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRCH3Q96II8 KRT8P12-202ENST00000472924 1397 ntBASIC17.63■□□□□ 0.41
LRCH3Q96II8 AC073439.1-201ENST00000624121 1774 ntBASIC17.63■□□□□ 0.41
LRCH3Q96II8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRCH3Q96II8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRCH3Q96II8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRCH3Q96II8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRCH3Q96II8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.63■□□□□ 0.41
LRCH3Q96II8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRCH3Q96II8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
LRCH3Q96II8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.62■□□□□ 0.41
LRCH3Q96II8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRCH3Q96II8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRCH3Q96II8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRCH3Q96II8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRCH3Q96II8 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.62■□□□□ 0.41
LRCH3Q96II8 AL607033.1-201ENST00000623900 1599 ntBASIC17.62■□□□□ 0.41
LRCH3Q96II8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRCH3Q96II8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.62■□□□□ 0.41
LRCH3Q96II8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRCH3Q96II8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRCH3Q96II8 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.62■□□□□ 0.41
LRCH3Q96II8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRCH3Q96II8 AC131009.4-201ENST00000624048 1740 ntBASIC17.62■□□□□ 0.41
LRCH3Q96II8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRCH3Q96II8 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LRCH3Q96II8 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
LRCH3Q96II8 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRCH3Q96II8 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms