Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 TSPY22P-201ENST00000427496 604 ntBASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CHMP6Q96FZ7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 AC005089.1-201ENST00000619486 2241 ntBASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 MIR648-201ENST00000385046 94 ntBASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 KLF4P1-201ENST00000412782 1185 ntBASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP6Q96FZ7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms