Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM11Q96F44 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 AC093724.1-201ENST00000448659 1027 ntBASIC17.35■□□□□ 0.37
TRIM11Q96F44 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRIM11Q96F44 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM11Q96F44 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM11Q96F44 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM11Q96F44 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM11Q96F44 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM11Q96F44 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM11Q96F44 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM11Q96F44 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM11Q96F44 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM11Q96F44 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM11Q96F44 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM11Q96F44 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM11Q96F44 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM11Q96F44 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM11Q96F44 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM11Q96F44 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TRIM11Q96F44 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TRIM11Q96F44 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM11Q96F44 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRIM11Q96F44 CDC14C-201ENST00000428251 1719 ntBASIC17.34■□□□□ 0.37
TRIM11Q96F44 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM11Q96F44 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM11Q96F44 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM11Q96F44 BCAR1-209ENST00000546196 1340 ntBASIC17.34■□□□□ 0.37
TRIM11Q96F44 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM11Q96F44 AC104109.2-201ENST00000602919 1418 ntBASIC17.34■□□□□ 0.37
TRIM11Q96F44 AC064836.3-201ENST00000607928 673 ntBASIC17.34■□□□□ 0.37
TRIM11Q96F44 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM11Q96F44 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM11Q96F44 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM11Q96F44 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM11Q96F44 LINC02447-202ENST00000501888 2146 ntBASIC17.33■□□□□ 0.37
TRIM11Q96F44 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM11Q96F44 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.33■□□□□ 0.37
TRIM11Q96F44 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.33■□□□□ 0.37
TRIM11Q96F44 AC069224.1-201ENST00000566372 1715 ntBASIC17.33■□□□□ 0.37
TRIM11Q96F44 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM11Q96F44 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM11Q96F44 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM11Q96F44 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM11Q96F44 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM11Q96F44 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM11Q96F44 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM11Q96F44 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM11Q96F44 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM11Q96F44 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
TRIM11Q96F44 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.33■□□□□ 0.36
TRIM11Q96F44 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.33■□□□□ 0.36
TRIM11Q96F44 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM11Q96F44 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.33■□□□□ 0.36
TRIM11Q96F44 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms