Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 AL645728.1-201ENST00000366221 2101 ntBASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM43Q96BQ3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 U82695.1-201ENST00000635752 1889 ntBASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 SOCS2P1-201ENST00000417727 557 ntBASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 AC106760.1-201ENST00000508690 800 ntBASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 AC106872.11-201ENST00000605838 421 ntBASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 INTS4P2-202ENST00000614726 2019 ntBASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM43Q96BQ3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 AC134312.5-201ENST00000568031 1313 ntBASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 MIR326-201ENST00000362220 95 ntBASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 FAM86HP-204ENST00000513466 959 ntBASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 AL049840.4-201ENST00000602422 811 ntBASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 RHOXF1P1-202ENST00000635473 501 ntBASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM43Q96BQ3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms