Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4DQ92854 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4DQ92854 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4DQ92854 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4DQ92854 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4DQ92854 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4DQ92854 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4DQ92854 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4DQ92854 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 RN7SL589P-201ENST00000481268 310 ntBASIC17.6■□□□□ 0.41
SEMA4DQ92854 AC069335.1-201ENST00000489972 472 ntBASIC17.6■□□□□ 0.41
SEMA4DQ92854 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 AC105233.2-201ENST00000523697 349 ntBASIC17.6■□□□□ 0.41
SEMA4DQ92854 AF228730.5-201ENST00000530288 346 ntBASIC17.6■□□□□ 0.41
SEMA4DQ92854 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 AC055717.3-201ENST00000622967 595 ntBASIC17.6■□□□□ 0.41
SEMA4DQ92854 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4DQ92854 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4DQ92854 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4DQ92854 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4DQ92854 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4DQ92854 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4DQ92854 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 AC010491.1-201ENST00000563101 2797 ntBASIC17.6■□□□□ 0.41
SEMA4DQ92854 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
SEMA4DQ92854 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4DQ92854 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SEMA4DQ92854 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.59■□□□□ 0.41
SEMA4DQ92854 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4DQ92854 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SEMA4DQ92854 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4DQ92854 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4DQ92854 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.59■□□□□ 0.41
SEMA4DQ92854 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
SEMA4DQ92854 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4DQ92854 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4DQ92854 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4DQ92854 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4DQ92854 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.59■□□□□ 0.41
SEMA4DQ92854 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
SEMA4DQ92854 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.59■□□□□ 0.41
SEMA4DQ92854 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.59■□□□□ 0.41
SEMA4DQ92854 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4DQ92854 AP000842.3-202ENST00000569238 1080 ntBASIC17.59■□□□□ 0.41
SEMA4DQ92854 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.59■□□□□ 0.41
SEMA4DQ92854 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.59■□□□□ 0.41
SEMA4DQ92854 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.59■□□□□ 0.41
SEMA4DQ92854 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SEMA4DQ92854 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4DQ92854 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.59■□□□□ 0.41
SEMA4DQ92854 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.59■□□□□ 0.41
SEMA4DQ92854 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4DQ92854 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4DQ92854 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
SEMA4DQ92854 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.58■□□□□ 0.41
SEMA4DQ92854 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.58■□□□□ 0.41
SEMA4DQ92854 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SEMA4DQ92854 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.58■□□□□ 0.41
SEMA4DQ92854 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SEMA4DQ92854 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SEMA4DQ92854 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SEMA4DQ92854 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.58■□□□□ 0.4
SEMA4DQ92854 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEMA4DQ92854 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.58■□□□□ 0.4
SEMA4DQ92854 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEMA4DQ92854 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.58■□□□□ 0.4
SEMA4DQ92854 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
SEMA4DQ92854 AC004461.1-201ENST00000412461 403 ntBASIC17.58■□□□□ 0.4
SEMA4DQ92854 AL592309.1-201ENST00000443127 649 ntBASIC17.58■□□□□ 0.4
SEMA4DQ92854 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SEMA4DQ92854 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.58■□□□□ 0.4
SEMA4DQ92854 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.58■□□□□ 0.4
SEMA4DQ92854 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.58■□□□□ 0.4
SEMA4DQ92854 AC093520.2-201ENST00000561830 333 ntBASIC17.58■□□□□ 0.4
SEMA4DQ92854 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.58■□□□□ 0.4
SEMA4DQ92854 MIR3687-2-201ENST00000577708 61 ntBASIC17.58■□□□□ 0.4
SEMA4DQ92854 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.58■□□□□ 0.4
SEMA4DQ92854 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.58■□□□□ 0.4
SEMA4DQ92854 MIR3687-1-201ENST00000614492 61 ntBASIC17.58■□□□□ 0.4
SEMA4DQ92854 SPTSSB-204ENST00000617024 1292 ntBASIC17.58■□□□□ 0.4
SEMA4DQ92854 AL513210.1-201ENST00000629608 234 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms