Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC9Q92623 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC9Q92623 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.63■□□□□ 0.09
TTC9Q92623 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC9Q92623 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TTC9Q92623 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.63■□□□□ 0.09
TTC9Q92623 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC9Q92623 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.63■□□□□ 0.09
TTC9Q92623 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC9Q92623 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC9Q92623 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC9Q92623 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC9Q92623 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TTC9Q92623 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 WASH6P-202ENST00000359512 1437 ntBASIC15.62■□□□□ 0.09
TTC9Q92623 PCDHB17P-201ENST00000539533 2393 ntBASIC15.62■□□□□ 0.09
TTC9Q92623 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.62■□□□□ 0.09
TTC9Q92623 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.62■□□□□ 0.09
TTC9Q92623 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.62■□□□□ 0.09
TTC9Q92623 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TTC9Q92623 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.62■□□□□ 0.09
TTC9Q92623 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.62■□□□□ 0.09
TTC9Q92623 SPDYE12P-201ENST00000618416 771 ntBASIC15.62■□□□□ 0.09
TTC9Q92623 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.62■□□□□ 0.09
TTC9Q92623 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.62■□□□□ 0.09
TTC9Q92623 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.62■□□□□ 0.09
TTC9Q92623 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.62■□□□□ 0.09
TTC9Q92623 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.62■□□□□ 0.09
TTC9Q92623 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.62■□□□□ 0.09
TTC9Q92623 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.62■□□□□ 0.09
TTC9Q92623 TUBB8P12-201ENST00000308911 1335 ntBASIC15.62■□□□□ 0.09
TTC9Q92623 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 TUBB7P-202ENST00000428444 1305 ntBASIC15.62■□□□□ 0.09
TTC9Q92623 TUBB8P7-204ENST00000567960 1332 ntBASIC15.62■□□□□ 0.09
TTC9Q92623 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.62■□□□□ 0.09
TTC9Q92623 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9Q92623 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.62■□□□□ 0.09
TTC9Q92623 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.62■□□□□ 0.09
TTC9Q92623 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
TTC9Q92623 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC9Q92623 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TTC9Q92623 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.61■□□□□ 0.09
TTC9Q92623 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.61■□□□□ 0.09
TTC9Q92623 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC9Q92623 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TTC9Q92623 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
TTC9Q92623 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.61■□□□□ 0.09
TTC9Q92623 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
TTC9Q92623 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.61■□□□□ 0.09
TTC9Q92623 AC079776.1-201ENST00000401540 1152 ntBASIC15.61■□□□□ 0.09
TTC9Q92623 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.61■□□□□ 0.09
TTC9Q92623 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.61■□□□□ 0.09
TTC9Q92623 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC9Q92623 ACA64.2-201ENST00000459014 129 ntBASIC15.61■□□□□ 0.09
TTC9Q92623 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TTC9Q92623 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.61■□□□□ 0.09
TTC9Q92623 AC027307.2-201ENST00000591252 911 ntBASIC15.61■□□□□ 0.09
TTC9Q92623 AL132655.2-201ENST00000596276 594 ntBASIC15.61■□□□□ 0.09
TTC9Q92623 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.61■□□□□ 0.09
TTC9Q92623 IGHV3-72-202ENST00000621503 303 ntBASIC15.61■□□□□ 0.09
TTC9Q92623 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC9Q92623 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.61■□□□□ 0.09
TTC9Q92623 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC9Q92623 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9Q92623 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms