Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 AC002056.1-201ENST00000395613 760 ntBASIC16.06■□□□□ 0.16
ATL1Q8WXF7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 AC005052.1-201ENST00000625181 2492 ntBASIC16.06■□□□□ 0.16
ATL1Q8WXF7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATL1Q8WXF7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 AC112191.1-201ENST00000523689 701 ntBASIC16.05■□□□□ 0.16
ATL1Q8WXF7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATL1Q8WXF7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 AC079328.2-201ENST00000561241 3354 ntBASIC16.04■□□□□ 0.16
ATL1Q8WXF7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 KRT18P58-201ENST00000527480 1120 ntBASIC16.04■□□□□ 0.16
ATL1Q8WXF7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 AL078644.1-201ENST00000609881 752 ntBASIC16.04■□□□□ 0.16
ATL1Q8WXF7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATL1Q8WXF7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 U82695.1-201ENST00000635752 1889 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms