Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CKAP2Q8WWK9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 PAWRP1-201ENST00000451083 565 ntBASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 RN7SL850P-201ENST00000579959 291 ntBASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.32■□□□□ 0.2
CKAP2Q8WWK9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 AC005622.1-201ENST00000636801 1703 ntBASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 TERF1P1-201ENST00000311003 1181 ntBASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 KRT18P57-201ENST00000443599 1254 ntBASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 AC011498.5-201ENST00000592027 486 ntBASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 AC005089.1-201ENST00000619486 2241 ntBASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 CICP23-201ENST00000605013 2741 ntBASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 NORAD-201ENST00000565493 5339 ntBASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CKAP2Q8WWK9 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms