Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SNED1Q8TER0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNED1Q8TER0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.64■□□□□ 0.74
SNED1Q8TER0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNED1Q8TER0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNED1Q8TER0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SNED1Q8TER0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.64■□□□□ 0.73
SNED1Q8TER0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.64■□□□□ 0.73
SNED1Q8TER0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNED1Q8TER0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNED1Q8TER0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNED1Q8TER0 PCGF3-213ENST00000620529 1899 ntBASIC19.64■□□□□ 0.73
SNED1Q8TER0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.64■□□□□ 0.73
SNED1Q8TER0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNED1Q8TER0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
SNED1Q8TER0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SNED1Q8TER0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SNED1Q8TER0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNED1Q8TER0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNED1Q8TER0 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNED1Q8TER0 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.64■□□□□ 0.73
SNED1Q8TER0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.64■□□□□ 0.73
SNED1Q8TER0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SNED1Q8TER0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.64■□□□□ 0.73
SNED1Q8TER0 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.64■□□□□ 0.73
SNED1Q8TER0 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.64■□□□□ 0.73
SNED1Q8TER0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.64■□□□□ 0.73
SNED1Q8TER0 AL022328.1-201ENST00000610050 478 ntBASIC19.64■□□□□ 0.73
SNED1Q8TER0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNED1Q8TER0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNED1Q8TER0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNED1Q8TER0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.64■□□□□ 0.73
SNED1Q8TER0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNED1Q8TER0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SNED1Q8TER0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNED1Q8TER0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNED1Q8TER0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNED1Q8TER0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNED1Q8TER0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNED1Q8TER0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNED1Q8TER0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNED1Q8TER0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNED1Q8TER0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.63■□□□□ 0.73
SNED1Q8TER0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNED1Q8TER0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.63■□□□□ 0.73
SNED1Q8TER0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.63■□□□□ 0.73
SNED1Q8TER0 GNRHR2-203ENST00000581100 1187 ntBASIC19.63■□□□□ 0.73
SNED1Q8TER0 AL139099.5-201ENST00000635274 300 ntBASIC19.63■□□□□ 0.73
SNED1Q8TER0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNED1Q8TER0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNED1Q8TER0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNED1Q8TER0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.63■□□□□ 0.73
SNED1Q8TER0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNED1Q8TER0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNED1Q8TER0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.63■□□□□ 0.73
SNED1Q8TER0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.63■□□□□ 0.73
SNED1Q8TER0 AL603756.1-201ENST00000606511 2163 ntBASIC19.63■□□□□ 0.73
SNED1Q8TER0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNED1Q8TER0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNED1Q8TER0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNED1Q8TER0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNED1Q8TER0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNED1Q8TER0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNED1Q8TER0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.62■□□□□ 0.73
SNED1Q8TER0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNED1Q8TER0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNED1Q8TER0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SNED1Q8TER0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNED1Q8TER0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SNED1Q8TER0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.62■□□□□ 0.73
SNED1Q8TER0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
SNED1Q8TER0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.62■□□□□ 0.73
SNED1Q8TER0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.62■□□□□ 0.73
SNED1Q8TER0 TDH-203ENST00000531764 1110 ntBASIC19.62■□□□□ 0.73
SNED1Q8TER0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.62■□□□□ 0.73
SNED1Q8TER0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.62■□□□□ 0.73
SNED1Q8TER0 AC006538.1-201ENST00000567905 1585 ntBASIC19.62■□□□□ 0.73
SNED1Q8TER0 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNED1Q8TER0 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.62■□□□□ 0.73
SNED1Q8TER0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.62■□□□□ 0.73
SNED1Q8TER0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNED1Q8TER0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNED1Q8TER0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.62■□□□□ 0.73
SNED1Q8TER0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNED1Q8TER0 INTS4P2-202ENST00000614726 2019 ntBASIC19.62■□□□□ 0.73
SNED1Q8TER0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNED1Q8TER0 GGT3P-204ENST00000453783 1664 ntBASIC19.61■□□□□ 0.73
SNED1Q8TER0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNED1Q8TER0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNED1Q8TER0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SNED1Q8TER0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNED1Q8TER0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
SNED1Q8TER0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNED1Q8TER0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNED1Q8TER0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNED1Q8TER0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNED1Q8TER0 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.61■□□□□ 0.73
SNED1Q8TER0 TARDBPP1-201ENST00000442013 1203 ntBASIC19.61■□□□□ 0.73
SNED1Q8TER0 FAM86LP-201ENST00000478302 853 ntBASIC19.61■□□□□ 0.73
SNED1Q8TER0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms