Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 AL671277.1-201ENST00000429656 993 ntBASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 AL161645.1-201ENST00000622716 1255 ntBASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 AC008741.2-201ENST00000612792 3115 ntBASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 AL355306.1-201ENST00000415580 579 ntBASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMARCC2Q8TAQ2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 AC010491.1-201ENST00000563101 2797 ntBASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 AC008894.3-201ENST00000624324 3103 ntBASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 CICP6-201ENST00000457191 2729 ntBASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 AC092474.2-201ENST00000424288 719 ntBASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 CNN2P11-201ENST00000429351 262 ntBASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 AC092183.1-201ENST00000469884 875 ntBASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms