Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 DUX4L27-201ENST00000554796 1261 ntBASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 MIR4515-201ENST00000584082 81 ntBASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 CYP2A7P1-201ENST00000595391 815 ntBASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 AL162727.3-201ENST00000635661 2787 ntBASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 AC006538.1-201ENST00000567905 1585 ntBASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 AC013467.2-201ENST00000605472 835 ntBASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 AL353732.1-201ENST00000569618 1459 ntBASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC33Q8N5R6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 HMGA1P7-201ENST00000406908 502 ntBASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 AC092474.2-201ENST00000424288 719 ntBASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 KRT18P32-201ENST00000424695 1287 ntBASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 AC243562.1-201ENST00000560672 389 ntBASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 CICP6-201ENST00000457191 2729 ntBASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC33Q8N5R6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms