Protein–RNA interactions for Protein: Q8N2G8

GHDC, GH3 domain-containing protein, humanhuman

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GHDCQ8N2G8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GHDCQ8N2G8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
GHDCQ8N2G8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.43■□□□□ 0.06
GHDCQ8N2G8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.43■□□□□ 0.06
GHDCQ8N2G8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GHDCQ8N2G8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
GHDCQ8N2G8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 TSEN15P1-201ENST00000423257 515 ntBASIC15.42■□□□□ 0.06
GHDCQ8N2G8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 AC027612.4-201ENST00000605371 583 ntBASIC15.42■□□□□ 0.06
GHDCQ8N2G8 ACTL9-202ENST00000612068 1252 ntBASIC15.42■□□□□ 0.06
GHDCQ8N2G8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 AC026691.1-201ENST00000602502 2017 ntBASIC15.42■□□□□ 0.06
GHDCQ8N2G8 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GHDCQ8N2G8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 AC002056.1-201ENST00000395613 760 ntBASIC15.41■□□□□ 0.06
GHDCQ8N2G8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 AL513210.1-201ENST00000629608 234 ntBASIC15.41■□□□□ 0.06
GHDCQ8N2G8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GHDCQ8N2G8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GHDCQ8N2G8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms