Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 AL160237.2-201ENST00000556165 472 ntBASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 AC107918.4-202ENST00000641623 219 ntBASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC170Q8IYT3 DBET-201ENST00000630918 3363 ntBASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 KRT18P27-201ENST00000427733 1299 ntBASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 AL121772.3-201ENST00000610840 674 ntBASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.63■□□□□ 0.41
CCDC170Q8IYT3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 AC012569.1-201ENST00000591191 1524 ntBASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 KRT18P31-201ENST00000506277 1292 ntBASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 AC021087.4-201ENST00000563761 564 ntBASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 AC023824.1-201ENST00000562945 2975 ntBASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC170Q8IYT3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC170Q8IYT3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms