Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC28Q86X40 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC28Q86X40 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 AC006449.6-201ENST00000612330 2296 ntBASIC14.66□□□□□ -0.06
LRRC28Q86X40 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC28Q86X40 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC28Q86X40 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC28Q86X40 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC28Q86X40 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 AC079776.4-201ENST00000511039 504 ntBASIC14.66□□□□□ -0.06
LRRC28Q86X40 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 STK25P1-201ENST00000585406 838 ntBASIC14.66□□□□□ -0.06
LRRC28Q86X40 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC28Q86X40 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC28Q86X40 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC28Q86X40 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC28Q86X40 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC28Q86X40 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC28Q86X40 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC28Q86X40 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC28Q86X40 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.66□□□□□ -0.06
LRRC28Q86X40 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC28Q86X40 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 KLF4P1-201ENST00000412782 1185 ntBASIC14.65□□□□□ -0.06
LRRC28Q86X40 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 HNRNPDP1-201ENST00000439535 754 ntBASIC14.65□□□□□ -0.06
LRRC28Q86X40 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 BX005266.1-201ENST00000473402 457 ntBASIC14.65□□□□□ -0.06
LRRC28Q86X40 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 FAM215A-202ENST00000632077 792 ntBASIC14.65□□□□□ -0.06
LRRC28Q86X40 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC28Q86X40 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LRRC28Q86X40 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRC28Q86X40 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRC28Q86X40 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRC28Q86X40 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms