| USP43 | Q70EL4 | MAL-203 | ENST00000353004 | 873 nt | TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | FAM239B-201 | ENST00000381106 | 1099 nt | TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | SSR4P1-202 | ENST00000429427 | 967 nt | TSL 5 BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | AC004975.2-201 | ENST00000442017 | 565 nt | TSL 5 BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | CCNG1-208 | ENST00000510664 | 994 nt | TSL 5 BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | JPH4-203 | ENST00000544177 | 1124 nt | TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | AL662844.1-201 | ENST00000546340 | 181 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | AC019129.2-201 | ENST00000609837 | 1235 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | GXYLT1P4-201 | ENST00000613576 | 1192 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | C4A-259 | ENST00000498271 | 5269 nt | TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | MC1R-202 | ENST00000555147 | 3099 nt | APPRIS P1 BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | PLAUR-201 | ENST00000221264 | 1610 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | P2RX5-209 | ENST00000552276 | 1642 nt | APPRIS ALT2 TSL 5 BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | WASHC2C-208 | ENST00000537517 | 4417 nt | APPRIS ALT2 TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | ARPC1B-201 | ENST00000252725 | 1551 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | KRT73-201 | ENST00000305748 | 2284 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | KCNG3-202 | ENST00000394973 | 3656 nt | APPRIS ALT1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | CCDC63-202 | ENST00000545036 | 1887 nt | APPRIS ALT2 TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | CDIPT-209 | ENST00000569956 | 1532 nt | APPRIS P1 TSL 5 BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | AC009133.1-201 | ENST00000569981 | 2449 nt | TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | ETV4-205 | ENST00000545954 | 1775 nt | TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | B3GAT1-201 | ENST00000312527 | 3652 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | FGR-202 | ENST00000374004 | 2350 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | DMTN-204 | ENST00000415253 | 2394 nt | TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | SHANK3-201 | ENST00000262795 | 7091 nt | APPRIS P5 TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | EIF4A3-201 | ENST00000269349 | 1734 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | REEP1-208 | ENST00000538924 | 1702 nt | TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | CHEK1-202 | ENST00000427383 | 1670 nt | TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | CHL1-202 | ENST00000397491 | 5235 nt | TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | DDX1-202 | ENST00000381341 | 2817 nt | APPRIS P1 TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | UBAC2-202 | ENST00000376440 | 2525 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | AP000787.1-201 | ENST00000501356 | 1926 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | TRIM36-202 | ENST00000379617 | 1322 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | TBCD-202 | ENST00000539345 | 3975 nt | TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | PRAMEF20-201 | ENST00000316412 | 1597 nt | APPRIS P1 TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | TMPRSS3-204 | ENST00000433957 | 2403 nt | APPRIS ALT1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | GML-201 | ENST00000220940 | 723 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | DEGS1-201 | ENST00000323699 | 2101 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | PFDN6-201 | ENST00000374606 | 740 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | CD99-205 | ENST00000381192 | 1245 nt | APPRIS P3 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | TCP10-202 | ENST00000397829 | 2141 nt | APPRIS P2 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | LINC01770-202 | ENST00000430109 | 510 nt | TSL 3 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | LINC00265-3P-201 | ENST00000447588 | 903 nt | BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | TTTY14-203 | ENST00000447937 | 920 nt | TSL 3 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | AC106795.1-205 | ENST00000512851 | 1056 nt | BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | AP000867.3-201 | ENST00000524675 | 377 nt | BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | AC012645.3-201 | ENST00000568506 | 470 nt | TSL 3 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | SRSF1-209 | ENST00000585096 | 568 nt | TSL 4 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | TYROBP-205 | ENST00000585901 | 620 nt | TSL 3 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | AC015961.2-201 | ENST00000589281 | 701 nt | TSL 3 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | AC104692.2-201 | ENST00000603054 | 253 nt | BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | C18orf21-207 | ENST00000610527 | 1059 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | C18orf21-208 | ENST00000618334 | 856 nt | TSL 3 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | MMRN2-201 | ENST00000372027 | 4375 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | TLE3-202 | ENST00000440567 | 2657 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | ZNF334-202 | ENST00000457685 | 3487 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | KCTD7-206 | ENST00000639828 | 5951 nt | APPRIS P3 TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | TBC1D3P5-201 | ENST00000579401 | 1545 nt | BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | DYRK3-201 | ENST00000367106 | 2329 nt | TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | TAF6-205 | ENST00000437822 | 2318 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | LEXM-201 | ENST00000358193 | 1777 nt | APPRIS P3 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | RANBP3-220 | ENST00000591092 | 1783 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | PDZD4-201 | ENST00000164640 | 3689 nt | APPRIS P3 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | ATP6V0A4-201 | ENST00000310018 | 3135 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | CDCA5-201 | ENST00000275517 | 2587 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | NR4A3-202 | ENST00000338488 | 2588 nt | TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | SLC3A2-208 | ENST00000536981 | 1486 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | SHC1-204 | ENST00000368450 | 3059 nt | APPRIS ALT1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | SHC1-205 | ENST00000368453 | 3062 nt | APPRIS P3 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | PAK6-203 | ENST00000542403 | 2540 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | PDE9A-203 | ENST00000335440 | 1728 nt | TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | ALOX15-202 | ENST00000570836 | 2784 nt | APPRIS P1 TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | RUNDC1-201 | ENST00000361677 | 3828 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | HCK-209 | ENST00000538448 | 2215 nt | APPRIS ALT2 TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | COMP-201 | ENST00000222271 | 2461 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | LAT-204 | ENST00000395461 | 1448 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | APBB1-207 | ENST00000529519 | 1442 nt | TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | COQ9-201 | ENST00000262507 | 1677 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | RHOC-201 | ENST00000285735 | 2199 nt | APPRIS P1 TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | ZNF662-201 | ENST00000328199 | 3186 nt | APPRIS P1 TSL 5 BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | ABI3-201 | ENST00000225941 | 2109 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | AGPAT2-201 | ENST00000371694 | 1391 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | LINC02381-201 | ENST00000508564 | 1369 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | REEP3-201 | ENST00000373758 | 5205 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | ALDH3A2-225 | ENST00000630662 | 1558 nt | TSL 5 BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | ARMC5-204 | ENST00000538189 | 3017 nt | APPRIS ALT2 TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | TOM1-206 | ENST00000425375 | 2252 nt | TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | ZNF252P-AS1-201 | ENST00000527067 | 3236 nt | BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | ZNF57-201 | ENST00000306908 | 2003 nt | APPRIS P2 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | ZNF57-205 | ENST00000614108 | 2002 nt | APPRIS ALT2 TSL 5 BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | AASDHPPT-201 | ENST00000278618 | 2955 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | KRT35-201 | ENST00000246639 | 1778 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | TTC29-201 | ENST00000325106 | 1785 nt | APPRIS P3 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | NFIX-214 | ENST00000592199 | 1509 nt | TSL 5 BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | OSBPL6-203 | ENST00000357080 | 2217 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | ACE-203 | ENST00000413513 | 2237 nt | TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | FOXP1-210 | ENST00000484350 | 1996 nt | TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | CARHSP1-201 | ENST00000311052 | 746 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | TCEAL2-201 | ENST00000329035 | 1080 nt | APPRIS P1 TSL 5 BASIC | 14.99 | □□□□□ -0.01 | | |
| USP43 | Q70EL4 | HDDC3-201 | ENST00000330334 | 1047 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |