Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMARCD3Q6STE5 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.03■□□□□ -0
SMARCD3Q6STE5 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.03■□□□□ -0
SMARCD3Q6STE5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.03■□□□□ -0
SMARCD3Q6STE5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.03■□□□□ -0
SMARCD3Q6STE5 SAPCD2P3-201ENST00000455031 850 ntBASIC15.03■□□□□ -0
SMARCD3Q6STE5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.03■□□□□ -0
SMARCD3Q6STE5 AC021087.4-201ENST00000563761 564 ntBASIC15.03■□□□□ -0
SMARCD3Q6STE5 PRELID1P1-202ENST00000567272 903 ntBASIC15.03■□□□□ -0
SMARCD3Q6STE5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.03■□□□□ -0
SMARCD3Q6STE5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.03■□□□□ -0
SMARCD3Q6STE5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.03■□□□□ -0
SMARCD3Q6STE5 AC107918.4-202ENST00000641623 219 ntBASIC15.03■□□□□ -0
SMARCD3Q6STE5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SMARCD3Q6STE5 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SMARCD3Q6STE5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMARCD3Q6STE5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
SMARCD3Q6STE5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SMARCD3Q6STE5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMARCD3Q6STE5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
SMARCD3Q6STE5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMARCD3Q6STE5 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMARCD3Q6STE5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SMARCD3Q6STE5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.03■□□□□ -0
SMARCD3Q6STE5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMARCD3Q6STE5 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMARCD3Q6STE5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.03■□□□□ -0
SMARCD3Q6STE5 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
SMARCD3Q6STE5 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
SMARCD3Q6STE5 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SMARCD3Q6STE5 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.02■□□□□ -0
SMARCD3Q6STE5 AL603832.2-201ENST00000566195 2125 ntBASIC15.02■□□□□ -0
SMARCD3Q6STE5 AC007326.2-201ENST00000624224 7579 ntBASIC15.02■□□□□ -0
SMARCD3Q6STE5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SMARCD3Q6STE5 PRAL-201ENST00000624952 3286 ntBASIC15.02■□□□□ -0
SMARCD3Q6STE5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMARCD3Q6STE5 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.02■□□□□ -0
SMARCD3Q6STE5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.02■□□□□ -0
SMARCD3Q6STE5 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMARCD3Q6STE5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMARCD3Q6STE5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMARCD3Q6STE5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SMARCD3Q6STE5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMARCD3Q6STE5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
SMARCD3Q6STE5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SMARCD3Q6STE5 HCG4-201ENST00000418983 998 ntBASIC15.02■□□□□ -0
SMARCD3Q6STE5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.02■□□□□ -0
SMARCD3Q6STE5 RPS15P9-201ENST00000494093 319 ntBASIC15.02■□□□□ -0
SMARCD3Q6STE5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.02■□□□□ -0
SMARCD3Q6STE5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.02■□□□□ -0
SMARCD3Q6STE5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.02■□□□□ -0
SMARCD3Q6STE5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMARCD3Q6STE5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.02■□□□□ -0
SMARCD3Q6STE5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.02■□□□□ -0
SMARCD3Q6STE5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.02■□□□□ -0
SMARCD3Q6STE5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.02□□□□□ -0.01
SMARCD3Q6STE5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 REXO1L8P-201ENST00000604378 1897 ntBASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SMARCD3Q6STE5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms