Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC079776.4-201ENST00000511039 504 ntBASIC15.8■□□□□ 0.12
PPP4R4Q6NUP7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.8■□□□□ 0.12
PPP4R4Q6NUP7 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.8■□□□□ 0.12
PPP4R4Q6NUP7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PPP4R4Q6NUP7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPP4R4Q6NUP7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.8■□□□□ 0.12
PPP4R4Q6NUP7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.8■□□□□ 0.12
PPP4R4Q6NUP7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PPP4R4Q6NUP7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.8■□□□□ 0.12
PPP4R4Q6NUP7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PPP4R4Q6NUP7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.8■□□□□ 0.12
PPP4R4Q6NUP7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPP4R4Q6NUP7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 AF238378.1-201ENST00000526806 358 ntBASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 AL121912.1-201ENST00000603683 238 ntBASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 FAM45BP-202ENST00000592932 1624 ntBASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 LINC00895-201ENST00000629028 1637 ntBASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.79■□□□□ 0.12
PPP4R4Q6NUP7 TCAF2P1-201ENST00000291129 2421 ntBASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 AL161772.1-201ENST00000610494 4412 ntBASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 ABCD1P5-201ENST00000445663 754 ntBASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 AL135999.2-201ENST00000622438 1686 ntBASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PPP4R4Q6NUP7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
PPP4R4Q6NUP7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms