Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 AC112191.1-201ENST00000523689 701 ntBASIC19.6■□□□□ 0.73
RNF20Q5VTR2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 AL513190.1-201ENST00000621254 727 ntBASIC19.6■□□□□ 0.73
RNF20Q5VTR2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 AC093724.1-201ENST00000448659 1027 ntBASIC19.59■□□□□ 0.73
RNF20Q5VTR2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 AP002472.1-201ENST00000577490 586 ntBASIC19.59■□□□□ 0.73
RNF20Q5VTR2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF20Q5VTR2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RNF20Q5VTR2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.58■□□□□ 0.73
RNF20Q5VTR2 NFIC-211ENST00000641145 8399 ntBASIC19.58■□□□□ 0.73
RNF20Q5VTR2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF20Q5VTR2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF20Q5VTR2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF20Q5VTR2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF20Q5VTR2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RNF20Q5VTR2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF20Q5VTR2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF20Q5VTR2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF20Q5VTR2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.58■□□□□ 0.73
RNF20Q5VTR2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF20Q5VTR2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF20Q5VTR2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF20Q5VTR2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
RNF20Q5VTR2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF20Q5VTR2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF20Q5VTR2 AC092865.6-201ENST00000642101 219 ntBASIC19.58■□□□□ 0.72
RNF20Q5VTR2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RNF20Q5VTR2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF20Q5VTR2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF20Q5VTR2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF20Q5VTR2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RNF20Q5VTR2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF20Q5VTR2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.58■□□□□ 0.72
RNF20Q5VTR2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
RNF20Q5VTR2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF20Q5VTR2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RNF20Q5VTR2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF20Q5VTR2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF20Q5VTR2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms