Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
VARS2Q5ST30 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
VARS2Q5ST30 PIN1P1-201ENST00000412108 996 ntBASIC17.3■□□□□ 0.36
VARS2Q5ST30 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC17.3■□□□□ 0.36
VARS2Q5ST30 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.3■□□□□ 0.36
VARS2Q5ST30 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC17.3■□□□□ 0.36
VARS2Q5ST30 AC060766.1-201ENST00000590824 627 ntBASIC17.3■□□□□ 0.36
VARS2Q5ST30 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
VARS2Q5ST30 AC004233.3-201ENST00000607794 1269 ntBASIC17.3■□□□□ 0.36
VARS2Q5ST30 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.3■□□□□ 0.36
VARS2Q5ST30 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
VARS2Q5ST30 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
VARS2Q5ST30 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
VARS2Q5ST30 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.3■□□□□ 0.36
VARS2Q5ST30 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
VARS2Q5ST30 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
VARS2Q5ST30 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VARS2Q5ST30 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.29■□□□□ 0.36
VARS2Q5ST30 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.29■□□□□ 0.36
VARS2Q5ST30 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.29■□□□□ 0.36
VARS2Q5ST30 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.29■□□□□ 0.36
VARS2Q5ST30 PSAT1P2-201ENST00000426107 972 ntBASIC17.29■□□□□ 0.36
VARS2Q5ST30 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.29■□□□□ 0.36
VARS2Q5ST30 AC022494.1-201ENST00000466044 728 ntBASIC17.29■□□□□ 0.36
VARS2Q5ST30 RN7SL618P-201ENST00000477850 296 ntBASIC17.29■□□□□ 0.36
VARS2Q5ST30 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.29■□□□□ 0.36
VARS2Q5ST30 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.29■□□□□ 0.36
VARS2Q5ST30 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 AL512361.1-201ENST00000554200 418 ntBASIC17.29■□□□□ 0.36
VARS2Q5ST30 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.29■□□□□ 0.36
VARS2Q5ST30 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.29■□□□□ 0.36
VARS2Q5ST30 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
VARS2Q5ST30 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
VARS2Q5ST30 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.29■□□□□ 0.36
VARS2Q5ST30 AC004840.1-201ENST00000636359 365 ntBASIC17.29■□□□□ 0.36
VARS2Q5ST30 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.29■□□□□ 0.36
VARS2Q5ST30 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
VARS2Q5ST30 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.29■□□□□ 0.36
VARS2Q5ST30 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 U82695.1-201ENST00000635752 1889 ntBASIC17.29■□□□□ 0.36
VARS2Q5ST30 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
VARS2Q5ST30 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VARS2Q5ST30 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARS2Q5ST30 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARS2Q5ST30 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.28■□□□□ 0.36
VARS2Q5ST30 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VARS2Q5ST30 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.28■□□□□ 0.36
VARS2Q5ST30 PRORSD1P-202ENST00000563365 2154 ntBASIC17.28■□□□□ 0.36
VARS2Q5ST30 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARS2Q5ST30 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VARS2Q5ST30 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARS2Q5ST30 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC17.28■□□□□ 0.36
VARS2Q5ST30 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC17.28■□□□□ 0.36
VARS2Q5ST30 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.28■□□□□ 0.36
VARS2Q5ST30 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.28■□□□□ 0.36
VARS2Q5ST30 AC010336.2-201ENST00000564226 506 ntBASIC17.28■□□□□ 0.36
VARS2Q5ST30 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
VARS2Q5ST30 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARS2Q5ST30 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
VARS2Q5ST30 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VARS2Q5ST30 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARS2Q5ST30 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VARS2Q5ST30 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARS2Q5ST30 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARS2Q5ST30 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARS2Q5ST30 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VARS2Q5ST30 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
VARS2Q5ST30 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.28■□□□□ 0.36
VARS2Q5ST30 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.28■□□□□ 0.36
VARS2Q5ST30 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VARS2Q5ST30 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VARS2Q5ST30 KRT8P12-202ENST00000472924 1397 ntBASIC17.28■□□□□ 0.36
VARS2Q5ST30 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms