Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FREM1Q5H8C1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
FREM1Q5H8C1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FREM1Q5H8C1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FREM1Q5H8C1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FREM1Q5H8C1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 RARRES2P9-201ENST00000565168 469 ntBASIC14.34□□□□□ -0.11
FREM1Q5H8C1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 AC024267.1-201ENST00000582320 895 ntBASIC14.34□□□□□ -0.11
FREM1Q5H8C1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 MIR3197-201ENST00000582241 73 ntBASIC14.34□□□□□ -0.11
FREM1Q5H8C1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 AL136982.4-201ENST00000437689 1740 ntBASIC14.34□□□□□ -0.11
FREM1Q5H8C1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM1Q5H8C1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 AC125807.1-201ENST00000483097 614 ntBASIC14.33□□□□□ -0.11
FREM1Q5H8C1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 MIR4321-201ENST00000592276 80 ntBASIC14.33□□□□□ -0.11
FREM1Q5H8C1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.33□□□□□ -0.11
FREM1Q5H8C1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 AL592424.1-201ENST00000563624 1536 ntBASIC14.33□□□□□ -0.12
FREM1Q5H8C1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 CNN2P2-201ENST00000443536 909 ntBASIC14.33□□□□□ -0.12
FREM1Q5H8C1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 CNN2P3-201ENST00000450201 906 ntBASIC14.33□□□□□ -0.12
FREM1Q5H8C1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 AL136317.3-201ENST00000618497 906 ntBASIC14.33□□□□□ -0.12
FREM1Q5H8C1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms