Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC4Q5GLZ8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERC4Q5GLZ8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.33■□□□□ 0.53
HERC4Q5GLZ8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERC4Q5GLZ8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERC4Q5GLZ8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
HERC4Q5GLZ8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERC4Q5GLZ8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERC4Q5GLZ8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HERC4Q5GLZ8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERC4Q5GLZ8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
HERC4Q5GLZ8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.33■□□□□ 0.53
HERC4Q5GLZ8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HERC4Q5GLZ8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 AC012645.4-201ENST00000610691 1061 ntBASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.33■□□□□ 0.52
HERC4Q5GLZ8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 RNA5SP421-201ENST00000516864 134 ntBASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 AL513210.1-201ENST00000629608 234 ntBASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HERC4Q5GLZ8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms