Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
ALFQ53S48 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
ALFQ53S48 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALFQ53S48 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
ALFQ53S48 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.84■□□□□ 0.29
ALFQ53S48 POU5F1P6-201ENST00000466990 990 ntBASIC16.84■□□□□ 0.29
ALFQ53S48 AC098859.1-201ENST00000502915 1238 ntBASIC16.84■□□□□ 0.29
ALFQ53S48 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.84■□□□□ 0.29
ALFQ53S48 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.84■□□□□ 0.29
ALFQ53S48 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALFQ53S48 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.84■□□□□ 0.29
ALFQ53S48 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.84■□□□□ 0.29
ALFQ53S48 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALFQ53S48 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.84■□□□□ 0.29
ALFQ53S48 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALFQ53S48 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.84■□□□□ 0.29
ALFQ53S48 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.84■□□□□ 0.29
ALFQ53S48 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALFQ53S48 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.84■□□□□ 0.29
ALFQ53S48 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.84■□□□□ 0.29
ALFQ53S48 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALFQ53S48 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.84■□□□□ 0.29
ALFQ53S48 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
ALFQ53S48 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ALFQ53S48 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ALFQ53S48 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
ALFQ53S48 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ALFQ53S48 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.83■□□□□ 0.29
ALFQ53S48 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ALFQ53S48 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
ALFQ53S48 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ALFQ53S48 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ALFQ53S48 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ALFQ53S48 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
ALFQ53S48 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.83■□□□□ 0.28
ALFQ53S48 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.83■□□□□ 0.28
ALFQ53S48 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.83■□□□□ 0.28
ALFQ53S48 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ALFQ53S48 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.83■□□□□ 0.28
ALFQ53S48 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.83■□□□□ 0.28
ALFQ53S48 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.83■□□□□ 0.28
ALFQ53S48 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.83■□□□□ 0.28
ALFQ53S48 AC004449.1-201ENST00000564240 433 ntBASIC16.83■□□□□ 0.28
ALFQ53S48 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.83■□□□□ 0.28
ALFQ53S48 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.83■□□□□ 0.28
ALFQ53S48 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ALFQ53S48 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALFQ53S48 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ALFQ53S48 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ALFQ53S48 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ALFQ53S48 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ALFQ53S48 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALFQ53S48 REXO1L8P-201ENST00000604378 1897 ntBASIC16.82■□□□□ 0.28
ALFQ53S48 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.82■□□□□ 0.28
ALFQ53S48 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ALFQ53S48 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ALFQ53S48 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.82■□□□□ 0.28
ALFQ53S48 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALFQ53S48 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
ALFQ53S48 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ALFQ53S48 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ALFQ53S48 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.82■□□□□ 0.28
ALFQ53S48 PMS2P2-201ENST00000425039 1128 ntBASIC16.82■□□□□ 0.28
ALFQ53S48 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.82■□□□□ 0.28
ALFQ53S48 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.82■□□□□ 0.28
ALFQ53S48 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.82■□□□□ 0.28
ALFQ53S48 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
ALFQ53S48 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALFQ53S48 RARRES2P9-201ENST00000565168 469 ntBASIC16.82■□□□□ 0.28
ALFQ53S48 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.82■□□□□ 0.28
ALFQ53S48 AP001059.3-201ENST00000619053 235 ntBASIC16.82■□□□□ 0.28
ALFQ53S48 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALFQ53S48 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ALFQ53S48 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ALFQ53S48 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ALFQ53S48 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.82■□□□□ 0.28
ALFQ53S48 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALFQ53S48 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALFQ53S48 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.82■□□□□ 0.28
ALFQ53S48 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ALFQ53S48 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ALFQ53S48 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms