Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 MIR4515-201ENST00000584082 81 ntBASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 AC007064.4-201ENST00000637740 555 ntBASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KHDC1Q4VXA5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 AL671710.1-201ENST00000610245 2349 ntBASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 AC023511.2-201ENST00000618803 211 ntBASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 AC006277.1-201ENST00000624348 1610 ntBASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 AC099063.4-201ENST00000641099 1602 ntBASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 FER1L4-210ENST00000615531 5998 ntBASIC16.63■□□□□ 0.25
KHDC1Q4VXA5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 SNX33P1-201ENST00000592116 1762 ntBASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 AC012569.1-201ENST00000591191 1524 ntBASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 BX842568.4-201ENST00000421222 227 ntBASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 CYP2A7P1-201ENST00000595391 815 ntBASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms