Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 UPF3AP3-201ENST00000420996 769 ntBASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 AC069335.1-201ENST00000489972 472 ntBASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 AC092865.5-201ENST00000545435 363 ntBASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 AL603832.2-201ENST00000566195 2125 ntBASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 AP000842.3-202ENST00000569238 1080 ntBASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 AC022145.2-201ENST00000598203 171 ntBASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 AC105339.1-204ENST00000636249 355 ntBASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
PTPN20Q4JDL3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN20Q4JDL3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms