Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.58■□□□□ 0.24
CDH17Q12864 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH17Q12864 AC093724.1-201ENST00000448659 1027 ntBASIC16.58■□□□□ 0.24
CDH17Q12864 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH17Q12864 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH17Q12864 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.58■□□□□ 0.24
CDH17Q12864 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH17Q12864 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
CDH17Q12864 AC068137.2-201ENST00000605408 478 ntBASIC16.58■□□□□ 0.24
CDH17Q12864 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH17Q12864 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH17Q12864 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CDH17Q12864 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH17Q12864 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH17Q12864 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH17Q12864 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH17Q12864 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CDH17Q12864 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH17Q12864 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH17Q12864 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH17Q12864 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH17Q12864 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH17Q12864 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH17Q12864 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDH17Q12864 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH17Q12864 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDH17Q12864 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.57■□□□□ 0.24
CDH17Q12864 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH17Q12864 AC016027.1-202ENST00000607927 1699 ntBASIC16.57■□□□□ 0.24
CDH17Q12864 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH17Q12864 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH17Q12864 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH17Q12864 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH17Q12864 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDH17Q12864 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 AL591424.1-201ENST00000442569 1213 ntBASIC16.57■□□□□ 0.24
CDH17Q12864 AC074386.1-202ENST00000463561 864 ntBASIC16.57■□□□□ 0.24
CDH17Q12864 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH17Q12864 RNA5SP416-201ENST00000516838 111 ntBASIC16.57■□□□□ 0.24
CDH17Q12864 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH17Q12864 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH17Q12864 PDPK2P-202ENST00000562415 1191 ntBASIC16.57■□□□□ 0.24
CDH17Q12864 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.57■□□□□ 0.24
CDH17Q12864 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CDH17Q12864 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.57■□□□□ 0.24
CDH17Q12864 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.57■□□□□ 0.24
CDH17Q12864 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.57■□□□□ 0.24
CDH17Q12864 AC120114.3-201ENST00000611923 658 ntBASIC16.57■□□□□ 0.24
CDH17Q12864 AL161645.1-201ENST00000622716 1255 ntBASIC16.57■□□□□ 0.24
CDH17Q12864 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH17Q12864 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.57■□□□□ 0.24
CDH17Q12864 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH17Q12864 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH17Q12864 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH17Q12864 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH17Q12864 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CDH17Q12864 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH17Q12864 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDH17Q12864 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH17Q12864 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH17Q12864 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH17Q12864 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH17Q12864 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
CDH17Q12864 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.56■□□□□ 0.24
CDH17Q12864 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH17Q12864 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH17Q12864 AC106730.1-201ENST00000566722 1090 ntBASIC16.56■□□□□ 0.24
CDH17Q12864 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH17Q12864 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH17Q12864 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH17Q12864 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CDH17Q12864 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH17Q12864 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH17Q12864 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDH17Q12864 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH17Q12864 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH17Q12864 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH17Q12864 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH17Q12864 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH17Q12864 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDH17Q12864 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH17Q12864 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms