Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.14□□□□□ -0.15
AP3S2P59780 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
AP3S2P59780 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.13□□□□□ -0.15
AP3S2P59780 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
AP3S2P59780 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
AP3S2P59780 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
AP3S2P59780 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
AP3S2P59780 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 AC092919.2-201ENST00000623631 1645 ntBASIC14.13□□□□□ -0.15
AP3S2P59780 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 HBZP1-201ENST00000354915 429 ntBASIC14.13□□□□□ -0.15
AP3S2P59780 MIR662-201ENST00000384847 95 ntBASIC14.13□□□□□ -0.15
AP3S2P59780 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.13□□□□□ -0.15
AP3S2P59780 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.13□□□□□ -0.15
AP3S2P59780 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.13□□□□□ -0.15
AP3S2P59780 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
AP3S2P59780 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.13□□□□□ -0.15
AP3S2P59780 Z99916.2-201ENST00000604037 246 ntBASIC14.13□□□□□ -0.15
AP3S2P59780 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.13□□□□□ -0.15
AP3S2P59780 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
AP3S2P59780 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 KRT8P39-201ENST00000396270 1433 ntBASIC14.13□□□□□ -0.15
AP3S2P59780 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.13□□□□□ -0.15
AP3S2P59780 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.13□□□□□ -0.15
AP3S2P59780 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.13□□□□□ -0.15
AP3S2P59780 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S2P59780 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.13□□□□□ -0.15
AP3S2P59780 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
AP3S2P59780 GRK6P1-201ENST00000400595 1711 ntBASIC14.12□□□□□ -0.15
AP3S2P59780 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.12□□□□□ -0.15
AP3S2P59780 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.12□□□□□ -0.15
AP3S2P59780 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
AP3S2P59780 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.12□□□□□ -0.15
AP3S2P59780 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.12□□□□□ -0.15
AP3S2P59780 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
AP3S2P59780 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.12□□□□□ -0.15
AP3S2P59780 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
AP3S2P59780 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.12□□□□□ -0.15
AP3S2P59780 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.12□□□□□ -0.15
AP3S2P59780 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.12□□□□□ -0.15
AP3S2P59780 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
AP3S2P59780 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
AP3S2P59780 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.12□□□□□ -0.15
AP3S2P59780 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.12□□□□□ -0.15
AP3S2P59780 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.12□□□□□ -0.15
AP3S2P59780 NAPSB-206ENST00000562112 1266 ntBASIC14.12□□□□□ -0.15
AP3S2P59780 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.12□□□□□ -0.15
AP3S2P59780 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
AP3S2P59780 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 AL138831.2-201ENST00000606564 490 ntBASIC14.12□□□□□ -0.15
AP3S2P59780 AL390719.2-201ENST00000606993 987 ntBASIC14.12□□□□□ -0.15
AP3S2P59780 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.12□□□□□ -0.15
AP3S2P59780 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.12□□□□□ -0.15
AP3S2P59780 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
AP3S2P59780 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms