Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH11P55287 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH11P55287 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH11P55287 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH11P55287 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH11P55287 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.1■□□□□ 0.01
CDH11P55287 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.1■□□□□ 0.01
CDH11P55287 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH11P55287 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.1■□□□□ 0.01
CDH11P55287 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.1■□□□□ 0.01
CDH11P55287 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CDH11P55287 AC092865.5-201ENST00000545435 363 ntBASIC15.1■□□□□ 0.01
CDH11P55287 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH11P55287 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH11P55287 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH11P55287 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH11P55287 AC005593.1-201ENST00000624894 515 ntBASIC15.1■□□□□ 0.01
CDH11P55287 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CDH11P55287 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.1■□□□□ 0.01
CDH11P55287 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH11P55287 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH11P55287 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH11P55287 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDH11P55287 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH11P55287 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH11P55287 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH11P55287 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CDH11P55287 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH11P55287 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH11P55287 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH11P55287 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDH11P55287 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.1■□□□□ 0.01
CDH11P55287 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDH11P55287 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDH11P55287 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH11P55287 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDH11P55287 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH11P55287 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.09■□□□□ 0.01
CDH11P55287 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH11P55287 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH11P55287 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH11P55287 AL603832.2-201ENST00000566195 2125 ntBASIC15.09■□□□□ 0.01
CDH11P55287 AL356488.2-201ENST00000602755 427 ntBASIC15.09■□□□□ 0.01
CDH11P55287 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.09■□□□□ 0.01
CDH11P55287 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH11P55287 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDH11P55287 AC067930.6-201ENST00000623257 4947 ntBASIC15.09■□□□□ 0.01
CDH11P55287 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH11P55287 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.09■□□□□ 0.01
CDH11P55287 AC002310.6-201ENST00000624451 1377 ntBASIC15.09■□□□□ 0.01
CDH11P55287 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH11P55287 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH11P55287 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH11P55287 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.08■□□□□ 0.01
CDH11P55287 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
CDH11P55287 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDH11P55287 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.08■□□□□ 0.01
CDH11P55287 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CDH11P55287 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CDH11P55287 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH11P55287 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.08■□□□□ 0
CDH11P55287 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.08■□□□□ 0
CDH11P55287 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH11P55287 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CDH11P55287 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.08■□□□□ 0
CDH11P55287 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH11P55287 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CDH11P55287 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH11P55287 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH11P55287 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
CDH11P55287 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH11P55287 BX842568.4-201ENST00000421222 227 ntBASIC15.08■□□□□ 0
CDH11P55287 PRYP5-201ENST00000451909 266 ntBASIC15.08■□□□□ 0
CDH11P55287 AC136632.2-201ENST00000512891 861 ntBASIC15.08■□□□□ 0
CDH11P55287 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.08■□□□□ 0
CDH11P55287 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.08■□□□□ 0
CDH11P55287 AC140113.2-201ENST00000604370 208 ntBASIC15.08■□□□□ 0
CDH11P55287 AC006538.3-201ENST00000612495 578 ntBASIC15.08■□□□□ 0
CDH11P55287 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH11P55287 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms