Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.31■□□□□ 0.04
PSMD4P55036 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.31■□□□□ 0.04
PSMD4P55036 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.31■□□□□ 0.04
PSMD4P55036 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PSMD4P55036 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSMD4P55036 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.31■□□□□ 0.04
PSMD4P55036 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PSMD4P55036 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
PSMD4P55036 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSMD4P55036 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.31■□□□□ 0.04
PSMD4P55036 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.31■□□□□ 0.04
PSMD4P55036 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PSMD4P55036 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.31■□□□□ 0.04
PSMD4P55036 ALOX12P2-203ENST00000570921 1945 ntBASIC15.31■□□□□ 0.04
PSMD4P55036 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PSMD4P55036 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PSMD4P55036 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PSMD4P55036 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSMD4P55036 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSMD4P55036 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PSMD4P55036 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PSMD4P55036 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PSMD4P55036 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSMD4P55036 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.3■□□□□ 0.04
PSMD4P55036 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.3■□□□□ 0.04
PSMD4P55036 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PSMD4P55036 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSMD4P55036 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.3■□□□□ 0.04
PSMD4P55036 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.3■□□□□ 0.04
PSMD4P55036 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PSMD4P55036 AC092474.2-201ENST00000424288 719 ntBASIC15.3■□□□□ 0.04
PSMD4P55036 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.3■□□□□ 0.04
PSMD4P55036 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSMD4P55036 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PSMD4P55036 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.3■□□□□ 0.04
PSMD4P55036 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.3■□□□□ 0.04
PSMD4P55036 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.3■□□□□ 0.04
PSMD4P55036 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PSMD4P55036 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.3■□□□□ 0.04
PSMD4P55036 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.3■□□□□ 0.04
PSMD4P55036 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.3■□□□□ 0.04
PSMD4P55036 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PSMD4P55036 AC006449.5-201ENST00000610658 2098 ntBASIC15.3■□□□□ 0.04
PSMD4P55036 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PSMD4P55036 AL513190.1-201ENST00000621254 727 ntBASIC15.3■□□□□ 0.04
PSMD4P55036 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PSMD4P55036 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PSMD4P55036 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.29■□□□□ 0.04
PSMD4P55036 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
PSMD4P55036 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.29■□□□□ 0.04
PSMD4P55036 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.29■□□□□ 0.04
PSMD4P55036 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.29■□□□□ 0.04
PSMD4P55036 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PSMD4P55036 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.29■□□□□ 0.04
PSMD4P55036 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 MTHFR-217ENST00000641820 1569 ntBASIC15.29■□□□□ 0.04
PSMD4P55036 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PSMD4P55036 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.29■□□□□ 0.04
PSMD4P55036 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.29■□□□□ 0.04
PSMD4P55036 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PSMD4P55036 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.29■□□□□ 0.04
PSMD4P55036 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PSMD4P55036 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
PSMD4P55036 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
PSMD4P55036 AL596257.1-201ENST00000641463 2694 ntBASIC15.29■□□□□ 0.04
PSMD4P55036 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.29■□□□□ 0.04
PSMD4P55036 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 POLD2P1-201ENST00000511220 997 ntBASIC15.29■□□□□ 0.04
PSMD4P55036 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.29■□□□□ 0.04
PSMD4P55036 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.29■□□□□ 0.04
PSMD4P55036 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.29■□□□□ 0.04
PSMD4P55036 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.29■□□□□ 0.04
PSMD4P55036 MTDHP5-201ENST00000598980 586 ntBASIC15.29■□□□□ 0.04
PSMD4P55036 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.29■□□□□ 0.04
PSMD4P55036 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PSMD4P55036 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PSMD4P55036 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms