Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NUP98P52948 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NUP98P52948 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.07■□□□□ 0.8
NUP98P52948 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NUP98P52948 ELP6-209ENST00000446787 894 ntTSL 3 BASIC20.06■□□□□ 0.8
NUP98P52948 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.06■□□□□ 0.8
NUP98P52948 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP98P52948 AC104596.2-201ENST00000512793 793 ntBASIC20.06■□□□□ 0.8
NUP98P52948 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.06■□□□□ 0.8
NUP98P52948 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC20.06■□□□□ 0.8
NUP98P52948 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.06■□□□□ 0.8
NUP98P52948 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.06■□□□□ 0.8
NUP98P52948 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP98P52948 PDIA3P1-201ENST00000471856 1510 ntBASIC20.06■□□□□ 0.8
NUP98P52948 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP98P52948 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP98P52948 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NUP98P52948 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NUP98P52948 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP98P52948 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP98P52948 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP98P52948 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NUP98P52948 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP98P52948 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
NUP98P52948 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.06■□□□□ 0.8
NUP98P52948 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.06■□□□□ 0.8
NUP98P52948 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.06■□□□□ 0.8
NUP98P52948 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.06■□□□□ 0.8
NUP98P52948 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NUP98P52948 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NUP98P52948 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP98P52948 AC092171.3-201ENST00000610122 2651 ntBASIC20.06■□□□□ 0.8
NUP98P52948 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUP98P52948 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NUP98P52948 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NUP98P52948 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUP98P52948 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NUP98P52948 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUP98P52948 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NUP98P52948 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NUP98P52948 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.05■□□□□ 0.8
NUP98P52948 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUP98P52948 AC136604.1-201ENST00000418535 575 ntBASIC20.05■□□□□ 0.8
NUP98P52948 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NUP98P52948 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NUP98P52948 AC104989.1-201ENST00000519711 778 ntBASIC20.05■□□□□ 0.8
NUP98P52948 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.05■□□□□ 0.8
NUP98P52948 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC20.05■□□□□ 0.8
NUP98P52948 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NUP98P52948 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
NUP98P52948 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.05■□□□□ 0.8
NUP98P52948 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUP98P52948 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUP98P52948 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.05■□□□□ 0.8
NUP98P52948 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.04■□□□□ 0.8
NUP98P52948 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NUP98P52948 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUP98P52948 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.04■□□□□ 0.8
NUP98P52948 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.04■□□□□ 0.8
NUP98P52948 TIMM17BP1-201ENST00000545713 516 ntBASIC20.04■□□□□ 0.8
NUP98P52948 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NUP98P52948 AC134407.2-201ENST00000625089 1978 ntBASIC20.04■□□□□ 0.8
NUP98P52948 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUP98P52948 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUP98P52948 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
NUP98P52948 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
NUP98P52948 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC20.04■□□□□ 0.8
NUP98P52948 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.04■□□□□ 0.8
NUP98P52948 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NUP98P52948 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NUP98P52948 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUP98P52948 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NUP98P52948 AP001282.1-201ENST00000531301 1499 ntBASIC20.04■□□□□ 0.8
NUP98P52948 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NUP98P52948 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NUP98P52948 FAM86MP-201ENST00000340703 885 ntBASIC20.04■□□□□ 0.8
NUP98P52948 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.04■□□□□ 0.8
NUP98P52948 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NUP98P52948 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.04■□□□□ 0.8
NUP98P52948 AC022210.1-201ENST00000449856 793 ntBASIC20.04■□□□□ 0.8
NUP98P52948 SLED1-202ENST00000512051 380 ntBASIC20.04■□□□□ 0.8
NUP98P52948 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC20.04■□□□□ 0.8
NUP98P52948 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NUP98P52948 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
NUP98P52948 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUP98P52948 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
NUP98P52948 FLJ38576-201ENST00000623820 2459 ntBASIC20.04■□□□□ 0.8
NUP98P52948 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.03■□□□□ 0.8
NUP98P52948 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NUP98P52948 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUP98P52948 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NUP98P52948 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUP98P52948 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUP98P52948 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUP98P52948 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NUP98P52948 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.03■□□□□ 0.8
NUP98P52948 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.03■□□□□ 0.8
NUP98P52948 PHKG1P2-201ENST00000457537 863 ntBASIC20.03■□□□□ 0.8
NUP98P52948 FTH1P14-201ENST00000482930 551 ntBASIC20.03■□□□□ 0.8
NUP98P52948 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms